Jennifer Liu
0acb0abd1e
* Add non-optimize FASTCOVER * Minor fix * Pass param as value instead of pointer
25 lines
1.2 KiB
Markdown
25 lines
1.2 KiB
Markdown
FastCover Dictionary Builder
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### Permitted Arguments:
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Input File/Directory (in=fileName): required; file/directory used to build dictionary; if directory, will operate recursively for files inside directory; can include multiple files/directories, each following "in="
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Output Dictionary (out=dictName): if not provided, default to fastCoverDict
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Dictionary ID (dictID=#): nonnegative number; if not provided, default to 0
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Maximum Dictionary Size (maxdict=#): positive number; in bytes, if not provided, default to 110KB
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Size of Selected Segment (k=#): positive number; in bytes; if not provided, default to 200
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Size of Dmer (d=#): either 6 or 8; if not provided, default to 8
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Number of steps (steps=#): positive number, if not provided, default to 32
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Percentage of samples used for training(split=#): positive number; if not provided, default to 100
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###Running Test:
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make test
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###Usage:
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To build a FASTCOVER dictionary with the provided arguments: make ARG= followed by arguments
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If k or d is not provided, the optimize version of FASTCOVER is run.
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### Examples:
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make ARG="in=../../../lib/dictBuilder out=dict100 dictID=520"
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make ARG="in=../../../lib/dictBuilder in=../../../lib/compress"
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